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Information on didactic, research and institutional assignments on this page are certified by the University; more information, prepared by the professor, are available on the personal web page and in the curriculum vitae indicated on this webpage.
Information on professor
ProfessorMasseroli Marco
QualificationAssociate professor full time
Belonging DepartmentDipartimento di Elettronica, Informazione e Bioingegneria
Scientific-Disciplinary SectorING-INF/05 - Information Processing Systems
Curriculum VitaeDownload CV (242.27Kb - 31/05/2018)

Professor's office hours
Elettronica e Informazione ----TuesdayFrom 14:45
To 16:15
02-2399-3553--The best interaction modality is by email, also to agreed on and reserve meetings
Professor's personal websitehttp://www.bioinformatics.polimi.it/masseroli/

Data source: RE.PUBLIC@POLIMI - Research Publications at Politecnico di Milano

List of publications and reserach products for the year 2021 (Show all details | Hide all details)
Type Title of the Publicaiton/Product
Conference proceedings
Investigating transcript isoform RNA-seq data and machine learning techniques for breast cancer subtyping (Show >>)
Journal Articles
A review on viral data sources and search systems for perspective mitigation of COVID-19 (Show >>)
Computational analysis of fused co-expression networks for the identification of candidate cancer gene biomarkers (Show >>)
Federated sharing and processing of genomic datasets for tertiary data analysis (Show >>)
Gene function finding through cross-organism ensemble learning (Show >>)
Investigating Deep Learning based Breast Cancer Subtyping using Pan-cancer and Multi-omic Data (Show >>)
META-BASE: a Novel Architecture for Large-Scale Genomic Metadata Integration (Show >>)
Predicting Drug Synergism by Means of Non-Negative Matrix Tri-Factorization (Show >>)
The road towards data integration in human genomics: players, steps and interactions (Show >>)

List of publications and reserach products for the year 2020 (Show all details | Hide all details)
Type Title of the Publicaiton/Product
Contributions on scientific books
Evaluating Deep Semi-supervised Learning for Whole-Transcriptome Breast Cancer Subtyping (Show >>)
Exposing and characterizing subpopulations of distinctly regulated genes by k-plane regression (Show >>)
Network modeling and analysis of normal and cancer gene expression data (Show >>)
Conference proceedings
Boosting perspectives for breast cancer intrinsic subtyping on RNA-sequencing data (Show >>)
Hybrid evolutionary framework for selection of genes predicting breast cancer relapse (Show >>)
Journal Articles
Association rule mining to identify transcription factor interactions in genomic regions (Show >>)
Machine learning for RNA sequencing-based intrinsic subtyping of breast cancer (Show >>)
Matrix Factorization-based Technique for Drug Repurposing Predictions (Show >>)
OpenGDC: Unifying, Modeling, Integrating Cancer Genomic Data and Clinical Metadata (Show >>)
SMfinder: Small molecules finder for metabolomics and lipidomics analysis (Show >>)
Search and comparison of (epi)genomic feature patterns in multiple genome browser tracks (Show >>)

List of publications and reserach products for the year 2019 (Show all details | Hide all details)
Type Title of the Publicaiton/Product
Contributions on scientific books
Analysis of Gene Regulatory Networks Inferred from ChIP-seq Data (Show >>)
Biological and Medical Ontologies: Disease Ontology (DO) (Show >>)
Biological and Medical Ontologies: GO and GOA (Show >>)
Biological and Medical Ontologies: Human Phenotype Ontology (HPO) (Show >>)
Biological and Medical Ontologies: Integrative Bioinformatics (Show >>)
Biological and Medical Ontologies: Introduction (Show >>)
Biological and Medical Ontologies: PRotein Ontology (PRO) (Show >>)
Biological and Medical Ontologies: Systems Biology Ontology (SBO) (Show >>)
Conference proceedings
Comparing classic, deep and semi-supervised learning for whole-transcriptome breast cancer subtyping (Show >>)
Computational analysis and comparison of gene networks from TCGA normal and cancer data (Show >>)
De novo sequence-based method for ncRPI prediction using structural information (Show >>)
Drug Repositioning Predictions by Non-Negative Matrix Tri-Factorization of Integrated Association Data (Show >>)
Genomic big data management, modeling and computing (Show >>)
Network-based approach to identify new indications for existing drugs in the DrugBank database (Show >>)
Non-negative Matrix Tri-Factorization for Data Integration and Network-based Drug Repositioning (Show >>)
Using GMQL-web for querying, downloading and integrating public with private genomic datasets (Show >>)
Journal Articles
GenoSurf: metadata driven semantic search system for integrated genomic datasets (Show >>)
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data (Show >>)

List of publications and reserach products for the year 2018 (Show all details | Hide all details)
Type Title of the Publicaiton/Product
Contributions on scientific books
Experiences in the development of a data management system for genomics (Show >>)
Overview of GeCo: A Project for Exploring and Integrating Signals from the Genome (Show >>)
Conference proceedings
Computational pipeline for automatic chromatin state identification in multiple tissues (Show >>)
Demonstration of GenoMetric Query Language (Show >>)
Modeling Gene Transcriptional Regulation by Means of Hyperplanes Genetic Clustering (Show >>)
OpenGDC: standardizing, extending, and integrating genomics data of cancer (Show >>)
Unveiling gene expression histonic regulative patterns by hyperplanes clustering (Show >>)
Using Non-Negative Matrix Tri-Factorization to find candidate drugs for the treatment of Alternating Hemiplegia of Childhood (AHC) (Show >>)
Journal Articles
Novelty indicator for enhanced prioritization of predicted gene ontology annotations (Show >>)

List of publications and reserach products for the year 2017 (Show all details | Hide all details)
Type Title of the Publicaiton/Product
Abstract in Atti di convegno
Data-driven genomic computing: making sense of signals from the genome (Show >>)
Conference proceedings
Conceptual modeling for genomics: Building an integrated repository of open data (Show >>)
Scalable genomic data management system on the cloud (Show >>)
Journal Articles
Analysis of metabolomic data: tools, current strategies and future challenges for omics data integration (Show >>)
Data management for heterogeneous genomic datasets (Show >>)
Explorative visual analytics on interval-based genomic data and their metadata (Show >>)
Indexing Next-Generation Sequencing data (Show >>)
MuSERA: Multiple sample enriched region assessment (Show >>)
TCGA2BED: Extracting, extending, integrating, and querying The Cancer Genome Atlas (Show >>)
manifesti v. 3.4.18 / 3.4.18
Area Servizi ICT